5.13n (8) - beta - March 22, 2022
- Allow co-localization study for XYShape/ShapePlot...
- Fix an issue in Contour Roi (triggered in nucleoid detection)
- Fix an issue in ShapePlot (Only the categories of the last group were taken into account)
- Add a new version of CombineStack
- Fix a few issues in Charts
- Fix the offset issue for overlay
- Upgrade XYShape/ShapePlot to display Curved Shaped bacteria
- Fix a few issues in Chain detection
- Add SuperPlots & ShapeProportionPlot
- Fix Criteria Error
- Add a way to edit Features in the Editing Interface
- Improve SuperPlots
- Fix a few issues in Tree display (Profiles)
- Add a way to rescue old version of Results
- Add a way to export cell boundaries as a binary mask or a label map
- Add a way to export Shape as Relative Polygon coordinates
- Add the DeepIJThresholding option for segmentation
- Add a way to generate demograph with more than one profile
- Fix an issue with DeepImagej
How to Install MicrobeJ
- Locate the ImageJ or Fiji Folder:
- On Windows...
The ImageJ or Fiji Folder is most likely located in "C:\Program File\" or in "C:\Users\[your name]\". Note it is strongly recommend that you store your Fiji.app directory somewhere in your user space (e.g., "C:\Users\[your name]\Fiji.app") rather than in "C:\Program Files".
- On MacOSX...
The ImageJ or Fiji Application is most likely located in "\Applications\". Right-click (or control-click) the Fiji.app, select "Show package contents" and locate the "plugins" folder.
- On Windows...
- Download MicrobeJ_.jar into the "ImageJ\plugins\" or "Fiji.app\plugins\" folder.
- For ImageJ, you must also download and drop bioformatspackage.jar into the "ImageJ\plugins\" folder.
- Restart ImageJ or Fiji.
- Select 'MicrobeJ' in the Plugins menu.
Older Versions of MicrobeJ
- 5.13 a 1 | b 1 | c 1 | d 1 | e 1 | f 1 | h 1 | i 1 | j 1 | k 1 , 2 | l 1 , 2 , 3 , 4 , 5 , 6 , 7 , 8 , 9 , 10 , 11 , 12 , 13 , 14 , 15 , 16 , 17 , 18 , 19 , 20 , 21 , 22 | m 1 , 2 , 3 , 4 , 5 , 6 , 7 , 8 , 9 , 10 , 11 , 12 , 13 , 14 , 15 , 16 , 17 , 18 | n 1 , 2 , 3 , 4 , 5 , 6 , 7 , 8